James Hutchins
Proteomics tools and resources
MS data search engines:
Mascot • Sequest • X!Tandem • MaxQuant
Mass-spec data repositories:
MS data management & analysis:
TPP • ProHits • Scaffold • myProMS
Tools from the IMP-IMBA-GMI Protein Chemistry facility
MS Amanda: Novel search engine for high/high MS data
PhosphoRS: State-of-the-art site localisation tool for phospho-sites
SimpatiQCo: Quality control for proteomics
Proteomics software downloads:
Pacific Northwest National Laboratory
Network visualisation tools:
See also:
Hutchins, JRA (2014) “What’s that gene (or protein)? Online resources for exploring functions of genes, transcripts, and proteins” Mol. Biol. Cell 25:8 1187-1201; doi:10.1091/mbc.E13-10-0602. Invited Technical Perspective article.
Abstract + artcle download (journal website) • PubMed entry • Google Scholar entry
Periodic updates to the Supplemental Document will be made available here: please check from time to time.
